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Taxonomic classifier for sequencing reads (bulk and single-cell data, short and long read) using FM-index with run-block compressed BWT.

Provides an open source framework for online education taxonomies.

Influence Analysis and Estimation - Survey, Papers, and Taxonomy

A Risk-Based Prioritization Taxonomy for prioritizing CVEs (Common Vulnerabilities and Exposures).

Phylogenetic and taxonomic analysis for genomes and metagenomes

A versatile toolkit for k-mers with taxonomic information

A taxonomy of attacks on software supply chains in the form of an attack tree, based on and linked to numerous real-world incidents and other resources. The taxonomy as well as related safeguards can be explored using an interactive visualization tool.

Parse NCBI taxonomy and accessions to find taxonomic assignments

This repository hosts files relating to the TF-CSIRT Reference Security Incident Taxonomy Working Group.

An open taxonomy and scoring framework for evaluating AI agent sandboxes: 7 defense layers, 7 threat categories, 3 evaluation dimensions, 27 "sandboxes" scored.