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GitHub Open Source Repositories

Search: MicroscoPy

Page 4

Showing 10 results from 508

M

usnistgov/MIST

GitHub Java Other

Microscopy Image Stitching Tool

โ˜… 174 Forks 42 usnistgov Updated 07 May 2026

External source

GitHub

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C

seung-lab/cloud-volume

GitHub Python BSD 3-Clause "New" or "Revised" License

Read and write Neuroglancer datasets programmatically.

โ˜… 173 Forks 53 seung-lab Updated 04 Jun 2026

External source

GitHub

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P

pyxem/pyxem

GitHub Python GNU General Public License v3.0

An open-source Python library for multi-dimensional diffraction microscopy.

โ˜… 171 Forks 93 pyxem Updated 08 Jun 2026

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GitHub

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O

zeiss-microscopy/OAD

GitHub Jupyter Notebook GNU General Public License v3.0

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

โ˜… 166 Forks 55 zeiss-microscopy Updated 08 Jun 2026

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GitHub

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S

ImagingDataCommons/slim

GitHub TypeScript Apache License 2.0

Interoperable web-based DICOM slide microscopy viewer and annotation tool

โ˜… 164 Forks 47 ImagingDataCommons Updated 07 Jun 2026

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GitHub

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A

kuixu/awesome-cryoem

GitHub Creative Commons Zero v1.0 Universal

A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.

โ˜… 159 Forks 35 kuixu Updated 20 Apr 2026

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GitHub

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M

Lee-Gihun/MEDIAR

GitHub Python MIT License

(NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality Microscopy"

โ˜… 158 Forks 36 Lee-Gihun Updated 26 May 2026

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GitHub

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D

yinhaoz/denoising-fluorescence

GitHub Python MIT License

CVPR 2019: Fluorescence Microscopy Denoising (FMD) dataset

โ˜… 154 Forks 15 yinhaoz Updated 25 May 2026

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GitHub

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M

labsyspharm/mcmicro

GitHub Nextflow MIT License

Multiple-choice microscopy pipeline

โ˜… 153 Forks 64 labsyspharm Updated 08 Jun 2026

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GitHub

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M

aafkegros/MicroscopyNodes

GitHub Python GNU General Public License v3.0

Loading and handling microscopy data in blender

โ˜… 153 Forks 11 aafkegros Updated 02 Jun 2026

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GitHub

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Pagination Page 4 of 51

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Showing first 508 accessible GitHub results.