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GitHub Open Source Repositories

Search: taxonomy

Page 2

Showing 10 results from 597

K

DerrickWood/kraken2

GitHub C++ MIT License

The second version of the Kraken taxonomic sequence classification system

β˜… 912 Forks 307 DerrickWood Updated 11 Jun 2026
E

etetoolkit/ete

GitHub Python GNU General Public License v3.0

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

β˜… 880 Forks 228 etetoolkit Updated 10 Jun 2026
C

WebDevStudios/custom-post-type-ui

GitHub PHP GNU General Public License v2.0

Admin UI settings for creating custom post types and taxonomies in WordPress

β˜… 638 Forks 141 WebDevStudios Updated 11 May 2026
A

Arcanum-Sec/arc_pi_taxonomy

GitHub Other

The Arcanum Prompt Injection Taxonomy

β˜… 634 Forks 109 Arcanum-Sec Updated 15 Jun 2026
G

Ecogenomics/GTDBTk

GitHub Python GNU General Public License v3.0

GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

β˜… 607 Forks 99 Ecogenomics Updated 11 Jun 2026
A

Harbinzzy/All-in-One-Image-Restoration-Survey

GitHub

[IEEE TPAMI 2025] A Survey on All-in-One Image Restoration: Taxonomy, Evaluation and Future Trends

β˜… 558 Forks 35 Harbinzzy Updated 14 Jun 2026
D

benjjneb/dada2

GitHub R GNU Lesser General Public License v3.0

Accurate sample inference from amplicon data with single nucleotide resolution

β˜… 552 Forks 168 benjjneb Updated 15 May 2026
V

bugcrowd/vulnerability-rating-taxonomy

GitHub Python Apache License 2.0

Bugcrowd’s baseline priority ratings for common security vulnerabilities

β˜… 543 Forks 126 bugcrowd Updated 09 Jun 2026
T

shenwei356/taxonkit

GitHub Go MIT License

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

β˜… 473 Forks 30 shenwei356 Updated 15 Jun 2026
L

rinvex/laravel-categories

GitHub PHP MIT License

Rinvex Categorizable is a polymorphic Laravel package, for category management. You can categorize any eloquent model with ease, and utilize the power of Nested Sets, and the awesomeness of Sluggable, and Translatable models out of the box.

β˜… 467 Forks 76 rinvex Updated 12 Jun 2026
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Showing first 597 accessible GitHub results.