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GitHub Open Source Repositories

Search: dada2

Page 2

Showing 9 results from 19

HPCBio/TADA

GitHub Nextflow MIT License

TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region

★ 22 Forks 15 HPCBio Updated 09 May 2026

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ErnakovichLab/dada2_ernakovichlab

GitHub HTML Other

No description available from source.

★ 21 Forks 6 ErnakovichLab Updated 15 Apr 2026

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GitHub

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HPCBio/16S-rDNA-dada2-pipeline

GitHub Nextflow MIT License

**DEFUNCT** dada2-based Nextflow pipeline for multiple amplicon data. See website for up-to-date version

★ 20 Forks 20 HPCBio Updated 18 Jul 2025

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GitHub

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vmaffei/dada2_to_picrust

GitHub

Experimental pipeline to perform de novo PICRUSt on de-noised amplicon sequence variants (ASV)

★ 19 Forks 1 vmaffei Updated 13 Nov 2023

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guokai8/microbial

GitHub R GNU General Public License v3.0

Do microbiome analysis with dada2 and phyloseq object

★ 15 Forks 3 guokai8 Updated 22 Mar 2026

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GitHub

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moyn413/nifHdada2

GitHub R

dada2 formatted nifH database

★ 13 Forks 4 moyn413 Updated 24 Nov 2025

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GitHub

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quadram-institute-bioscience/dadaist2

GitHub HTML MIT License

Dadaist2 🟨 Highway to R

★ 13 Forks 5 quadram-institute-bioscience Updated 07 Mar 2025

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microUCPH/amplicon_data_analysis

GitHub HTML

Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project

★ 12 Forks 6 microUCPH Updated 03 Jun 2025

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claraqin/neonMicrobe

GitHub R GNU Lesser General Public License v3.0

Processing NEON soil microbe marker gene sequence data into ASV tables.

★ 12 Forks 4 claraqin Updated 26 Feb 2026

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GitHub

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9 results on this page · 19 total found

Showing first 19 accessible GitHub results.