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Search: DNA-seq-analysis
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Showing 6 results from 6
crazyhottommy/DNA-seq-analysis
GitHub ShellDNA sequencing analysis notes from Ming Tang
External source
GitHub
seasoncloud/Alleloscope
GitHub RAlleloscope is a method for allele-specific copy number estimation that can be applied to single cell DNA and ATAC sequencing data (separately or in combination). Allele-specific estimation allows for the more accurate delineation of copy number states and the detection of subclonal copy-neutral ... Read more
External source
GitHub
jfoox/abrfngs2
GitHub RAnalysis and figure generation code for the ABRF NGS Phase II Study on DNA-seq reproducibility
External source
GitHub
NIGMS/DNA-Methylation-Sequencing-Analysis-with-WGBS
GitHub Jupyter NotebookIn this module, you will learn how to download raw sequence data, calculate differentially methylated regions, and run a canonical methyl-seq pipeline in Nextflow
External source
GitHub
CL-CHEN-Lab/OK-Seq
GitHub R GNU General Public License v3.0R package for the analysis of OK-Seq data to study DNA replication fork directionality: from count matrices, RFD calculation to inititation/termination zone calling.
External source
GitHub
ejh243/BrainFANS
GitHub R OtherComplex Disease Epigenomics Group's quality control and analysis pipelines for DNA methylation arrays, SNP arrays, BS-Seq, ATAC-Seq and ChIP-Seq
External source
GitHub